Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 AC007322.4-201ENST00000509611 723 ntBASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 AC231657.2-201ENST00000624556 255 ntBASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.96□□□□□ -0.17
KCNIP4Q6PIL6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 AC008741.2-201ENST00000612792 3115 ntBASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.96□□□□□ -0.18
KCNIP4Q6PIL6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 CROCCP2-202ENST00000412962 2773 ntBASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 AC100791.3-201ENST00000617619 330 ntBASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 KRT8P45-201ENST00000414328 1447 ntBASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
KCNIP4Q6PIL6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 AC007322.1-201ENST00000426983 750 ntBASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.94□□□□□ -0.18
KCNIP4Q6PIL6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms