Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF549Q6P9A3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 AC104076.2-201ENST00000448912 469 ntBASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 KRT89P-201ENST00000620027 1478 ntBASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF549Q6P9A3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 RNF152P1-201ENST00000397754 604 ntBASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 HYMAI.1-201ENST00000620949 238 ntBASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ZNF549Q6P9A3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF549Q6P9A3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ZNF549Q6P9A3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF549Q6P9A3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF549Q6P9A3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ZNF549Q6P9A3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF549Q6P9A3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF549Q6P9A3 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms