Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 AP003071.4-201ENST00000562276 1284 ntBASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RUNDC3AQ59EK9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 AC022898.2-201ENST00000616822 1312 ntBASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 UNC93B2-201ENST00000285383 730 ntBASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 TSPY20P-201ENST00000450910 630 ntBASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 RBM17P1-201ENST00000453646 1190 ntBASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 LINC00304-203ENST00000565008 1864 ntBASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 CROCCP2-202ENST00000412962 2773 ntBASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RUNDC3AQ59EK9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 GCSHP5-201ENST00000443090 522 ntBASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 AC116562.4-202ENST00000641738 218 ntBASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RUNDC3AQ59EK9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.96■□□□□ 0.31
RUNDC3AQ59EK9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms