Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRCA2P51587 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BRCA2P51587 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.98■□□□□ 0.79
BRCA2P51587 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.98■□□□□ 0.79
BRCA2P51587 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
BRCA2P51587 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
BRCA2P51587 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 AC092919.2-201ENST00000623631 1645 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 AC022494.1-201ENST00000466044 728 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 IGHV3-65-201ENST00000523210 341 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
BRCA2P51587 DUX4L27-201ENST00000554796 1261 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 AC051619.7-201ENST00000568314 623 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
BRCA2P51587 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.97■□□□□ 0.79
BRCA2P51587 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
BRCA2P51587 AC112698.1-201ENST00000510299 916 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 AL606495.2-201ENST00000605867 535 ntBASIC19.97■□□□□ 0.79
BRCA2P51587 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.97■□□□□ 0.79
BRCA2P51587 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRCA2P51587 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
BRCA2P51587 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 SPDYE21P-201ENST00000413323 827 ntBASIC19.96■□□□□ 0.79
BRCA2P51587 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.96■□□□□ 0.79
BRCA2P51587 AC004877.2-201ENST00000623941 599 ntBASIC19.96■□□□□ 0.79
BRCA2P51587 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
BRCA2P51587 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.96■□□□□ 0.79
BRCA2P51587 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
BRCA2P51587 RHOQP3-201ENST00000437982 621 ntBASIC19.96■□□□□ 0.79
BRCA2P51587 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.96■□□□□ 0.79
BRCA2P51587 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.96■□□□□ 0.79
BRCA2P51587 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
BRCA2P51587 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 MIR4751-201ENST00000578027 74 ntBASIC19.96■□□□□ 0.79
BRCA2P51587 AC008761.3-201ENST00000624803 892 ntBASIC19.96■□□□□ 0.79
BRCA2P51587 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRCA2P51587 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.96■□□□□ 0.79
BRCA2P51587 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.95■□□□□ 0.78
BRCA2P51587 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.95■□□□□ 0.78
BRCA2P51587 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.95■□□□□ 0.78
BRCA2P51587 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BRCA2P51587 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.95■□□□□ 0.78
BRCA2P51587 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.95■□□□□ 0.78
BRCA2P51587 AL589182.2-201ENST00000619332 1049 ntBASIC19.95■□□□□ 0.78
BRCA2P51587 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.95■□□□□ 0.78
BRCA2P51587 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
BRCA2P51587 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.95■□□□□ 0.78
BRCA2P51587 PRYP5-201ENST00000451909 266 ntBASIC19.95■□□□□ 0.78
BRCA2P51587 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BRCA2P51587 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.95■□□□□ 0.78
BRCA2P51587 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRCA2P51587 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.94■□□□□ 0.78
BRCA2P51587 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCA2P51587 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
BRCA2P51587 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
BRCA2P51587 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCA2P51587 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCA2P51587 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRCA2P51587 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.94■□□□□ 0.78
BRCA2P51587 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.94■□□□□ 0.78
BRCA2P51587 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRCA2P51587 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
BRCA2P51587 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
BRCA2P51587 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRCA2P51587 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.94■□□□□ 0.78
BRCA2P51587 ACTG1P14-201ENST00000446382 1122 ntBASIC19.94■□□□□ 0.78
BRCA2P51587 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms