Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
HOXA10P31260 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA10P31260 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA10P31260 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA10P31260 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.83■■□□□ 1.09
HOXA10P31260 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
HOXA10P31260 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
HOXA10P31260 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.83■■□□□ 1.09
HOXA10P31260 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.83■■□□□ 1.09
HOXA10P31260 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA10P31260 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HOXA10P31260 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.83■■□□□ 1.09
HOXA10P31260 METTL21AP1-201ENST00000438852 635 ntBASIC21.83■■□□□ 1.09
HOXA10P31260 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.83■■□□□ 1.09
HOXA10P31260 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.83■■□□□ 1.09
HOXA10P31260 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
HOXA10P31260 AC018845.2-201ENST00000568326 409 ntBASIC21.83■■□□□ 1.09
HOXA10P31260 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXA10P31260 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.83■■□□□ 1.09
HOXA10P31260 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXA10P31260 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXA10P31260 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
HOXA10P31260 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.83■■□□□ 1.09
HOXA10P31260 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HOXA10P31260 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HOXA10P31260 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.82■■□□□ 1.08
HOXA10P31260 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.82■■□□□ 1.08
HOXA10P31260 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 AC003669.1-201ENST00000334569 611 ntBASIC21.82■■□□□ 1.08
HOXA10P31260 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 HTR5BP-201ENST00000430851 1154 ntBASIC21.82■■□□□ 1.08
HOXA10P31260 SIGLEC30P-201ENST00000455569 941 ntBASIC21.82■■□□□ 1.08
HOXA10P31260 RFPL4AP1-201ENST00000530883 850 ntBASIC21.82■■□□□ 1.08
HOXA10P31260 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.82■■□□□ 1.08
HOXA10P31260 AC004790.2-201ENST00000623588 572 ntBASIC21.82■■□□□ 1.08
HOXA10P31260 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.82■■□□□ 1.08
HOXA10P31260 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HOXA10P31260 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.82■■□□□ 1.08
HOXA10P31260 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HOXA10P31260 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.81■■□□□ 1.08
HOXA10P31260 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 IGLL3P-201ENST00000412472 434 ntBASIC21.81■■□□□ 1.08
HOXA10P31260 SNHG9-202ENST00000564014 471 ntBASIC21.81■■□□□ 1.08
HOXA10P31260 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
HOXA10P31260 MIR4751-201ENST00000578027 74 ntBASIC21.81■■□□□ 1.08
HOXA10P31260 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.81■■□□□ 1.08
HOXA10P31260 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.81■■□□□ 1.08
HOXA10P31260 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
HOXA10P31260 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXA10P31260 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
HOXA10P31260 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXA10P31260 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXA10P31260 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
HOXA10P31260 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HOXA10P31260 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HOXA10P31260 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.8■■□□□ 1.08
HOXA10P31260 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.8■■□□□ 1.08
HOXA10P31260 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXA10P31260 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.8■■□□□ 1.08
HOXA10P31260 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.8■■□□□ 1.08
HOXA10P31260 AL805961.1-202ENST00000641562 540 ntBASIC21.8■■□□□ 1.08
HOXA10P31260 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HOXA10P31260 AC073592.3-201ENST00000625118 1834 ntBASIC21.8■■□□□ 1.08
HOXA10P31260 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXA10P31260 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.8■■□□□ 1.08
HOXA10P31260 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXA10P31260 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.79■■□□□ 1.08
HOXA10P31260 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXA10P31260 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXA10P31260 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HOXA10P31260 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.79■■□□□ 1.08
HOXA10P31260 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HOXA10P31260 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms