Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 MIR3180-5-201ENST00000583743 153 ntBASIC17.34■□□□□ 0.37
COX4I1P13073 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.34■□□□□ 0.37
COX4I1P13073 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I1P13073 AC124016.1-201ENST00000609552 612 ntBASIC17.34■□□□□ 0.37
COX4I1P13073 AC110285.5-201ENST00000611501 352 ntBASIC17.34■□□□□ 0.37
COX4I1P13073 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I1P13073 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I1P13073 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.34■□□□□ 0.37
COX4I1P13073 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I1P13073 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I1P13073 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I1P13073 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
COX4I1P13073 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I1P13073 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.37
COX4I1P13073 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I1P13073 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.33■□□□□ 0.37
COX4I1P13073 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
COX4I1P13073 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I1P13073 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
COX4I1P13073 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.33■□□□□ 0.37
COX4I1P13073 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
COX4I1P13073 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.33■□□□□ 0.36
COX4I1P13073 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
COX4I1P13073 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
COX4I1P13073 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.33■□□□□ 0.36
COX4I1P13073 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.33■□□□□ 0.36
COX4I1P13073 CR392000.1-201ENST00000624770 1228 ntBASIC17.33■□□□□ 0.36
COX4I1P13073 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COX4I1P13073 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
COX4I1P13073 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.33■□□□□ 0.36
COX4I1P13073 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.33■□□□□ 0.36
COX4I1P13073 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 AL024508.2-201ENST00000607749 1894 ntBASIC17.33■□□□□ 0.36
COX4I1P13073 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I1P13073 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COX4I1P13073 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 HLA-J-201ENST00000462773 1622 ntBASIC17.32■□□□□ 0.36
COX4I1P13073 PCDHB19P-201ENST00000570871 2371 ntBASIC17.32■□□□□ 0.36
COX4I1P13073 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COX4I1P13073 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COX4I1P13073 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COX4I1P13073 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
COX4I1P13073 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.32■□□□□ 0.36
COX4I1P13073 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 AC133681.1-201ENST00000465482 601 ntBASIC17.32■□□□□ 0.36
COX4I1P13073 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.32■□□□□ 0.36
COX4I1P13073 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.32■□□□□ 0.36
COX4I1P13073 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.32■□□□□ 0.36
COX4I1P13073 MIR6786-201ENST00000616843 113 ntBASIC17.32■□□□□ 0.36
COX4I1P13073 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
COX4I1P13073 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I1P13073 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
COX4I1P13073 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COX4I1P13073 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COX4I1P13073 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COX4I1P13073 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.31■□□□□ 0.36
COX4I1P13073 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 AL139384.1-201ENST00000612143 3047 ntBASIC17.31■□□□□ 0.36
COX4I1P13073 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.31■□□□□ 0.36
COX4I1P13073 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COX4I1P13073 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms