Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 LINC01311-201ENST00000565162 1445 ntBASIC17.54■□□□□ 0.4
CDH1P12830 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH1P12830 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDH1P12830 AC138028.4-201ENST00000564984 1845 ntBASIC17.54■□□□□ 0.4
CDH1P12830 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH1P12830 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH1P12830 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH1P12830 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH1P12830 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH1P12830 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDH1P12830 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH1P12830 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH1P12830 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH1P12830 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.53■□□□□ 0.4
CDH1P12830 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH1P12830 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDH1P12830 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH1P12830 AC024563.2-201ENST00000603282 481 ntBASIC17.53■□□□□ 0.4
CDH1P12830 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH1P12830 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDH1P12830 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.53■□□□□ 0.4
CDH1P12830 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CDH1P12830 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 HTR7P1-202ENST00000624664 4411 ntBASIC17.53■□□□□ 0.4
CDH1P12830 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.53■□□□□ 0.4
CDH1P12830 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDH1P12830 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH1P12830 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH1P12830 AC012313.1-201ENST00000593393 3059 ntBASIC17.52■□□□□ 0.4
CDH1P12830 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.52■□□□□ 0.4
CDH1P12830 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH1P12830 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH1P12830 AL671277.2-201ENST00000458060 996 ntBASIC17.52■□□□□ 0.4
CDH1P12830 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH1P12830 VENTXP5-201ENST00000523979 775 ntBASIC17.52■□□□□ 0.4
CDH1P12830 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.52■□□□□ 0.4
CDH1P12830 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.52■□□□□ 0.4
CDH1P12830 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDH1P12830 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.52■□□□□ 0.4
CDH1P12830 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CDH1P12830 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CDH1P12830 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH1P12830 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH1P12830 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDH1P12830 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDH1P12830 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDH1P12830 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH1P12830 AC093010.1-201ENST00000473625 1624 ntBASIC17.51■□□□□ 0.39
CDH1P12830 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH1P12830 SIRPAP1-201ENST00000448467 1770 ntBASIC17.51■□□□□ 0.39
CDH1P12830 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH1P12830 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDH1P12830 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.51■□□□□ 0.39
CDH1P12830 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH1P12830 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH1P12830 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CDH1P12830 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH1P12830 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH1P12830 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDH1P12830 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.51■□□□□ 0.39
CDH1P12830 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms