Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL5A2P05997 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC23.5■■□□□ 1.35
COL5A2P05997 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
COL5A2P05997 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL5A2P05997 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.49■■□□□ 1.35
COL5A2P05997 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC23.49■■□□□ 1.35
COL5A2P05997 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC23.49■■□□□ 1.35
COL5A2P05997 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC23.49■■□□□ 1.35
COL5A2P05997 AC096734.2-201ENST00000562054 433 ntBASIC23.49■■□□□ 1.35
COL5A2P05997 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.49■■□□□ 1.35
COL5A2P05997 AL513210.1-201ENST00000629608 234 ntBASIC23.49■■□□□ 1.35
COL5A2P05997 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.49■■□□□ 1.35
COL5A2P05997 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
COL5A2P05997 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.49■■□□□ 1.35
COL5A2P05997 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL5A2P05997 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
COL5A2P05997 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.48■■□□□ 1.35
COL5A2P05997 BCAR1-209ENST00000546196 1340 ntBASIC23.48■■□□□ 1.35
COL5A2P05997 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
COL5A2P05997 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.48■■□□□ 1.35
COL5A2P05997 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC23.48■■□□□ 1.35
COL5A2P05997 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.48■■□□□ 1.35
COL5A2P05997 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.48■■□□□ 1.35
COL5A2P05997 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.48■■□□□ 1.35
COL5A2P05997 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
COL5A2P05997 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL5A2P05997 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
COL5A2P05997 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.47■■□□□ 1.35
COL5A2P05997 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
COL5A2P05997 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC23.47■■□□□ 1.35
COL5A2P05997 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.47■■□□□ 1.35
COL5A2P05997 CCND1-203ENST00000536559 553 ntTSL 3 BASIC23.47■■□□□ 1.35
COL5A2P05997 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC23.47■■□□□ 1.35
COL5A2P05997 AL096865.1-201ENST00000606796 927 ntBASIC23.47■■□□□ 1.35
COL5A2P05997 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL5A2P05997 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL5A2P05997 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL5A2P05997 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL5A2P05997 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.46■■□□□ 1.35
COL5A2P05997 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL5A2P05997 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
COL5A2P05997 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.46■■□□□ 1.35
COL5A2P05997 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
COL5A2P05997 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL5A2P05997 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.46■■□□□ 1.35
COL5A2P05997 ACTG1P14-201ENST00000446382 1122 ntBASIC23.46■■□□□ 1.35
COL5A2P05997 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.46■■□□□ 1.35
COL5A2P05997 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23.46■■□□□ 1.35
COL5A2P05997 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.46■■□□□ 1.35
COL5A2P05997 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
COL5A2P05997 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL5A2P05997 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.46■■□□□ 1.35
COL5A2P05997 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
COL5A2P05997 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
COL5A2P05997 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.45■■□□□ 1.34
COL5A2P05997 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
COL5A2P05997 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL5A2P05997 SIGLEC30P-201ENST00000455569 941 ntBASIC23.45■■□□□ 1.34
COL5A2P05997 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC23.45■■□□□ 1.34
COL5A2P05997 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
COL5A2P05997 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.45■■□□□ 1.34
COL5A2P05997 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.45■■□□□ 1.34
COL5A2P05997 LSM12-202ENST00000585388 942 ntTSL 3 BASIC23.45■■□□□ 1.34
COL5A2P05997 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC23.45■■□□□ 1.34
COL5A2P05997 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
COL5A2P05997 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
COL5A2P05997 AC093512.1-201ENST00000617969 520 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms