Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.65■□□□□ 0.74
VTNP04004 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VTNP04004 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.64■□□□□ 0.74
VTNP04004 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VTNP04004 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
VTNP04004 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.64■□□□□ 0.73
VTNP04004 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 SCARNA2-201ENST00000458748 420 ntBASIC19.64■□□□□ 0.73
VTNP04004 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.64■□□□□ 0.73
VTNP04004 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.64■□□□□ 0.73
VTNP04004 DUTP2-201ENST00000519164 463 ntBASIC19.64■□□□□ 0.73
VTNP04004 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.64■□□□□ 0.73
VTNP04004 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.64■□□□□ 0.73
VTNP04004 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VTNP04004 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.64■□□□□ 0.73
VTNP04004 AC097374.2-201ENST00000618617 1306 ntBASIC19.64■□□□□ 0.73
VTNP04004 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.64■□□□□ 0.73
VTNP04004 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.64■□□□□ 0.73
VTNP04004 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VTNP04004 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.64■□□□□ 0.73
VTNP04004 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VTNP04004 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
VTNP04004 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.63■□□□□ 0.73
VTNP04004 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VTNP04004 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.63■□□□□ 0.73
VTNP04004 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
VTNP04004 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.63■□□□□ 0.73
VTNP04004 AC243591.1-201ENST00000452967 1364 ntBASIC19.63■□□□□ 0.73
VTNP04004 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 IL9RP2-201ENST00000423948 1312 ntBASIC19.63■□□□□ 0.73
VTNP04004 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.63■□□□□ 0.73
VTNP04004 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.63■□□□□ 0.73
VTNP04004 AC021087.4-201ENST00000563761 564 ntBASIC19.63■□□□□ 0.73
VTNP04004 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.63■□□□□ 0.73
VTNP04004 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.63■□□□□ 0.73
VTNP04004 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.63■□□□□ 0.73
VTNP04004 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 MIR7706-201ENST00000613747 67 ntBASIC19.63■□□□□ 0.73
VTNP04004 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.63■□□□□ 0.73
VTNP04004 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTNP04004 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
VTNP04004 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.62■□□□□ 0.73
VTNP04004 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VTNP04004 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
VTNP04004 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.62■□□□□ 0.73
VTNP04004 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.62■□□□□ 0.73
VTNP04004 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.62■□□□□ 0.73
VTNP04004 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.62■□□□□ 0.73
VTNP04004 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 AC096633.1-201ENST00000422446 749 ntBASIC19.62■□□□□ 0.73
VTNP04004 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.62■□□□□ 0.73
VTNP04004 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 AL138781.2-201ENST00000617896 1843 ntBASIC19.62■□□□□ 0.73
VTNP04004 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.62■□□□□ 0.73
VTNP04004 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.62■□□□□ 0.73
VTNP04004 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTNP04004 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
VTNP04004 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VTNP04004 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms