Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP3BO95985 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP3BO95985 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TOP3BO95985 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.43■□□□□ 0.54
TOP3BO95985 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP3BO95985 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TOP3BO95985 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.43■□□□□ 0.54
TOP3BO95985 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP3BO95985 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TOP3BO95985 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TOP3BO95985 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TOP3BO95985 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.42■□□□□ 0.54
TOP3BO95985 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.42■□□□□ 0.54
TOP3BO95985 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.42■□□□□ 0.54
TOP3BO95985 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.42■□□□□ 0.54
TOP3BO95985 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.42■□□□□ 0.54
TOP3BO95985 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.42■□□□□ 0.54
TOP3BO95985 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.42■□□□□ 0.54
TOP3BO95985 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.42■□□□□ 0.54
TOP3BO95985 LINC00896-202ENST00000609602 2128 ntBASIC18.42■□□□□ 0.54
TOP3BO95985 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.42■□□□□ 0.54
TOP3BO95985 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.42■□□□□ 0.54
TOP3BO95985 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.42■□□□□ 0.54
TOP3BO95985 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 KRT18P1-202ENST00000452408 1331 ntBASIC18.42■□□□□ 0.54
TOP3BO95985 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TOP3BO95985 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TOP3BO95985 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.42■□□□□ 0.54
TOP3BO95985 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP3BO95985 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TOP3BO95985 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP3BO95985 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 AC106795.1-205ENST00000512851 1056 ntBASIC18.41■□□□□ 0.54
TOP3BO95985 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.41■□□□□ 0.54
TOP3BO95985 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP3BO95985 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 AC091304.2-201ENST00000564639 760 ntBASIC18.41■□□□□ 0.54
TOP3BO95985 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TOP3BO95985 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP3BO95985 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
TOP3BO95985 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP3BO95985 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TOP3BO95985 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.41■□□□□ 0.54
TOP3BO95985 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.41■□□□□ 0.54
TOP3BO95985 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP3BO95985 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TOP3BO95985 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TOP3BO95985 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP3BO95985 MYLKP1-201ENST00000509077 1580 ntBASIC18.4■□□□□ 0.54
TOP3BO95985 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TOP3BO95985 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TOP3BO95985 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.4■□□□□ 0.54
TOP3BO95985 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.4■□□□□ 0.54
TOP3BO95985 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TOP3BO95985 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TOP3BO95985 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TOP3BO95985 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.4■□□□□ 0.54
TOP3BO95985 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TOP3BO95985 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms