Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC24.8■■□□□ 1.56
BRD4O60885 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.8■■□□□ 1.56
BRD4O60885 AP001269.4-201ENST00000609611 512 ntBASIC24.8■■□□□ 1.56
BRD4O60885 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC24.79■■□□□ 1.56
BRD4O60885 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
BRD4O60885 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
BRD4O60885 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.79■■□□□ 1.56
BRD4O60885 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.79■■□□□ 1.56
BRD4O60885 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC24.79■■□□□ 1.56
BRD4O60885 MTCL1P1-201ENST00000446207 792 ntBASIC24.79■■□□□ 1.56
BRD4O60885 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC24.79■■□□□ 1.56
BRD4O60885 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC24.79■■□□□ 1.56
BRD4O60885 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.79■■□□□ 1.56
BRD4O60885 PRKN-208ENST00000610470 531 ntTSL 2 BASIC24.79■■□□□ 1.56
BRD4O60885 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 PRKN-209ENST00000612485 225 ntTSL 5 BASIC24.79■■□□□ 1.56
BRD4O60885 FAM215A-202ENST00000632077 792 ntBASIC24.79■■□□□ 1.56
BRD4O60885 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.79■■□□□ 1.56
BRD4O60885 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
BRD4O60885 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.78■■□□□ 1.56
BRD4O60885 AC007613.1-201ENST00000572811 2597 ntBASIC24.78■■□□□ 1.56
BRD4O60885 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC24.78■■□□□ 1.56
BRD4O60885 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
BRD4O60885 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
BRD4O60885 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC24.78■■□□□ 1.56
BRD4O60885 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC24.78■■□□□ 1.56
BRD4O60885 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC24.78■■□□□ 1.56
BRD4O60885 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
BRD4O60885 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC24.78■■□□□ 1.56
BRD4O60885 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.78■■□□□ 1.56
BRD4O60885 LITAF-211ENST00000572255 516 ntTSL 4 BASIC24.78■■□□□ 1.56
BRD4O60885 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
BRD4O60885 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC24.78■■□□□ 1.56
BRD4O60885 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC24.78■■□□□ 1.56
BRD4O60885 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC24.78■■□□□ 1.56
BRD4O60885 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC24.77■■□□□ 1.56
BRD4O60885 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
BRD4O60885 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC24.77■■□□□ 1.56
BRD4O60885 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC24.77■■□□□ 1.56
BRD4O60885 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
BRD4O60885 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.77■■□□□ 1.56
BRD4O60885 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24.77■■□□□ 1.56
BRD4O60885 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC24.77■■□□□ 1.56
BRD4O60885 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC24.77■■□□□ 1.56
BRD4O60885 KRT18P65-201ENST00000439811 1286 ntBASIC24.77■■□□□ 1.56
BRD4O60885 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC24.77■■□□□ 1.56
BRD4O60885 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC24.77■■□□□ 1.56
BRD4O60885 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC24.77■■□□□ 1.56
BRD4O60885 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.77■■□□□ 1.56
BRD4O60885 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
BRD4O60885 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
BRD4O60885 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC24.76■■□□□ 1.55
BRD4O60885 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC24.76■■□□□ 1.55
BRD4O60885 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
BRD4O60885 KRT18P13-201ENST00000400056 1290 ntBASIC24.76■■□□□ 1.55
BRD4O60885 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC24.76■■□□□ 1.55
BRD4O60885 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.76■■□□□ 1.55
BRD4O60885 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms