Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TSPAN3O60637 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TSPAN3O60637 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TSPAN3O60637 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TSPAN3O60637 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.5■□□□□ 0.55
TSPAN3O60637 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
TSPAN3O60637 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.5■□□□□ 0.55
TSPAN3O60637 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.5■□□□□ 0.55
TSPAN3O60637 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 AC004870.1-201ENST00000315132 882 ntBASIC18.5■□□□□ 0.55
TSPAN3O60637 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.5■□□□□ 0.55
TSPAN3O60637 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.5■□□□□ 0.55
TSPAN3O60637 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.5■□□□□ 0.55
TSPAN3O60637 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.5■□□□□ 0.55
TSPAN3O60637 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSPAN3O60637 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TSPAN3O60637 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.49■□□□□ 0.55
TSPAN3O60637 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.49■□□□□ 0.55
TSPAN3O60637 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.49■□□□□ 0.55
TSPAN3O60637 KRT16P4-201ENST00000453883 522 ntBASIC18.49■□□□□ 0.55
TSPAN3O60637 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.49■□□□□ 0.55
TSPAN3O60637 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.49■□□□□ 0.55
TSPAN3O60637 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.49■□□□□ 0.55
TSPAN3O60637 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.49■□□□□ 0.55
TSPAN3O60637 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TSPAN3O60637 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.49■□□□□ 0.55
TSPAN3O60637 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TSPAN3O60637 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.49■□□□□ 0.55
TSPAN3O60637 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSPAN3O60637 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.48■□□□□ 0.55
TSPAN3O60637 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 TP73-AS1-210ENST00000637775 1455 ntBASIC18.48■□□□□ 0.55
TSPAN3O60637 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.48■□□□□ 0.55
TSPAN3O60637 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TSPAN3O60637 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 RCN1P2-201ENST00000398357 915 ntBASIC18.48■□□□□ 0.55
TSPAN3O60637 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 POM121L3P-201ENST00000419331 1163 ntBASIC18.48■□□□□ 0.55
TSPAN3O60637 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 MIR5100-201ENST00000579544 119 ntBASIC18.48■□□□□ 0.55
TSPAN3O60637 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms