Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SSSCA1O60232 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.69□□□□□ -0.06
SSSCA1O60232 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 CKBP1-201ENST00000565489 1086 ntBASIC14.69□□□□□ -0.06
SSSCA1O60232 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 AL137784.2-201ENST00000607332 1000 ntBASIC14.69□□□□□ -0.06
SSSCA1O60232 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SSSCA1O60232 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.69□□□□□ -0.06
SSSCA1O60232 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.69□□□□□ -0.06
SSSCA1O60232 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.69□□□□□ -0.06
SSSCA1O60232 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SSSCA1O60232 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.69□□□□□ -0.06
SSSCA1O60232 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.69□□□□□ -0.06
SSSCA1O60232 AC009102.3-201ENST00000623118 1491 ntBASIC14.69□□□□□ -0.06
SSSCA1O60232 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.69□□□□□ -0.06
SSSCA1O60232 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSSCA1O60232 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.68□□□□□ -0.06
SSSCA1O60232 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
SSSCA1O60232 SDHAP2-201ENST00000455183 2001 ntBASIC14.68□□□□□ -0.06
SSSCA1O60232 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SSSCA1O60232 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.68□□□□□ -0.06
SSSCA1O60232 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SSSCA1O60232 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.68□□□□□ -0.06
SSSCA1O60232 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SSSCA1O60232 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.68□□□□□ -0.06
SSSCA1O60232 AC004951.3-201ENST00000418645 1148 ntBASIC14.68□□□□□ -0.06
SSSCA1O60232 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.68□□□□□ -0.06
SSSCA1O60232 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.68□□□□□ -0.06
SSSCA1O60232 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.68□□□□□ -0.06
SSSCA1O60232 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.68□□□□□ -0.06
SSSCA1O60232 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.68□□□□□ -0.06
SSSCA1O60232 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SSSCA1O60232 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
SSSCA1O60232 UBALD1-205ENST00000590891 2641 ntBASIC14.68□□□□□ -0.06
SSSCA1O60232 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.68□□□□□ -0.06
SSSCA1O60232 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.68□□□□□ -0.06
SSSCA1O60232 AL138688.1-201ENST00000624851 1594 ntBASIC14.68□□□□□ -0.06
SSSCA1O60232 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSSCA1O60232 AC008894.3-201ENST00000624324 3103 ntBASIC14.68□□□□□ -0.06
SSSCA1O60232 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSSCA1O60232 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SSSCA1O60232 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
SSSCA1O60232 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.67□□□□□ -0.06
SSSCA1O60232 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SSSCA1O60232 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSSCA1O60232 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.67□□□□□ -0.06
SSSCA1O60232 MCCD1P1-208ENST00000445732 328 ntBASIC14.67□□□□□ -0.06
SSSCA1O60232 KRT16P5-201ENST00000455284 522 ntBASIC14.67□□□□□ -0.06
SSSCA1O60232 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.67□□□□□ -0.06
SSSCA1O60232 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.67□□□□□ -0.06
SSSCA1O60232 AL138781.1-201ENST00000566567 1274 ntBASIC14.67□□□□□ -0.06
SSSCA1O60232 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms