Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.97■□□□□ 0.47
LDB2O43679 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 AC068472.1-201ENST00000474589 881 ntBASIC17.97■□□□□ 0.47
LDB2O43679 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB2O43679 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB2O43679 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.97■□□□□ 0.47
LDB2O43679 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB2O43679 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LDB2O43679 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.97■□□□□ 0.47
LDB2O43679 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDB2O43679 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.97■□□□□ 0.47
LDB2O43679 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
LDB2O43679 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LDB2O43679 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.96■□□□□ 0.47
LDB2O43679 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.96■□□□□ 0.47
LDB2O43679 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 AL121956.5-201ENST00000625261 221 ntBASIC17.96■□□□□ 0.47
LDB2O43679 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.96■□□□□ 0.47
LDB2O43679 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LDB2O43679 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LDB2O43679 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LDB2O43679 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LDB2O43679 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.96■□□□□ 0.46
LDB2O43679 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.96■□□□□ 0.46
LDB2O43679 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LDB2O43679 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LDB2O43679 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LDB2O43679 LINC00896-202ENST00000609602 2128 ntBASIC17.95■□□□□ 0.46
LDB2O43679 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 AC112698.1-201ENST00000510299 916 ntBASIC17.95■□□□□ 0.46
LDB2O43679 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.95■□□□□ 0.46
LDB2O43679 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.95■□□□□ 0.46
LDB2O43679 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.95■□□□□ 0.46
LDB2O43679 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LDB2O43679 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB2O43679 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LDB2O43679 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.95■□□□□ 0.46
LDB2O43679 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
LDB2O43679 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LDB2O43679 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LDB2O43679 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.94■□□□□ 0.46
LDB2O43679 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LDB2O43679 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LDB2O43679 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LDB2O43679 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms