Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 AC007952.6-201ENST00000573168 2673 ntBASIC17.23■□□□□ 0.35
CDX4O14627 AC003957.1-201ENST00000625108 2673 ntBASIC17.23■□□□□ 0.35
CDX4O14627 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDX4O14627 AC148477.5-201ENST00000625164 1645 ntBASIC17.23■□□□□ 0.35
CDX4O14627 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.23■□□□□ 0.35
CDX4O14627 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDX4O14627 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.23■□□□□ 0.35
CDX4O14627 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.23■□□□□ 0.35
CDX4O14627 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.23■□□□□ 0.35
CDX4O14627 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.23■□□□□ 0.35
CDX4O14627 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.23■□□□□ 0.35
CDX4O14627 AC010654.1-201ENST00000615722 808 ntBASIC17.23■□□□□ 0.35
CDX4O14627 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.23■□□□□ 0.35
CDX4O14627 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.23■□□□□ 0.35
CDX4O14627 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.23■□□□□ 0.35
CDX4O14627 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.23■□□□□ 0.35
CDX4O14627 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDX4O14627 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.23■□□□□ 0.35
CDX4O14627 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
CDX4O14627 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDX4O14627 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.22■□□□□ 0.35
CDX4O14627 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.22■□□□□ 0.35
CDX4O14627 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDX4O14627 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.22■□□□□ 0.35
CDX4O14627 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.22■□□□□ 0.35
CDX4O14627 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.22■□□□□ 0.35
CDX4O14627 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.22■□□□□ 0.35
CDX4O14627 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.22■□□□□ 0.35
CDX4O14627 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.22■□□□□ 0.35
CDX4O14627 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.22■□□□□ 0.35
CDX4O14627 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.22■□□□□ 0.35
CDX4O14627 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.22■□□□□ 0.35
CDX4O14627 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.22■□□□□ 0.35
CDX4O14627 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CDX4O14627 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.22■□□□□ 0.35
CDX4O14627 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CDX4O14627 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.22■□□□□ 0.35
CDX4O14627 AL513210.1-201ENST00000629608 234 ntBASIC17.22■□□□□ 0.35
CDX4O14627 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 AL353593.2-201ENST00000602529 1483 ntBASIC17.22■□□□□ 0.35
CDX4O14627 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.22■□□□□ 0.35
CDX4O14627 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.22■□□□□ 0.35
CDX4O14627 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDX4O14627 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDX4O14627 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 AC132938.5-201ENST00000624980 1813 ntBASIC17.21■□□□□ 0.35
CDX4O14627 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.21■□□□□ 0.35
CDX4O14627 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.21■□□□□ 0.35
CDX4O14627 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CDX4O14627 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CDX4O14627 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 COX5BP2-201ENST00000392354 334 ntBASIC17.21■□□□□ 0.35
CDX4O14627 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 RHOQP3-201ENST00000437982 621 ntBASIC17.21■□□□□ 0.35
CDX4O14627 AC074386.1-202ENST00000463561 864 ntBASIC17.21■□□□□ 0.35
CDX4O14627 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.21■□□□□ 0.35
CDX4O14627 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.21■□□□□ 0.35
CDX4O14627 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CDX4O14627 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.21■□□□□ 0.35
CDX4O14627 AC005498.2-205ENST00000593218 784 ntBASIC17.21■□□□□ 0.35
CDX4O14627 AC004835.2-201ENST00000603762 682 ntBASIC17.21■□□□□ 0.35
CDX4O14627 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.21■□□□□ 0.35
CDX4O14627 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.21■□□□□ 0.35
CDX4O14627 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CDX4O14627 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.21■□□□□ 0.35
CDX4O14627 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDX4O14627 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.21■□□□□ 0.35
CDX4O14627 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CDX4O14627 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDX4O14627 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms