Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CDC7O00311 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 LTB4R2-202ENST00000528054 3092 ntBASIC17.66■□□□□ 0.42
CDC7O00311 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.66■□□□□ 0.42
CDC7O00311 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDC7O00311 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC7O00311 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC7O00311 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDC7O00311 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDC7O00311 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.65■□□□□ 0.42
CDC7O00311 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.65■□□□□ 0.42
CDC7O00311 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDC7O00311 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
CDC7O00311 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 HLA-F-220ENST00000434407 884 ntBASIC17.65■□□□□ 0.42
CDC7O00311 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.65■□□□□ 0.42
CDC7O00311 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDC7O00311 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CDC7O00311 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.65■□□□□ 0.42
CDC7O00311 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDC7O00311 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDC7O00311 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC7O00311 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDC7O00311 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDC7O00311 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDC7O00311 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.65■□□□□ 0.42
CDC7O00311 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDC7O00311 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CDC7O00311 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDC7O00311 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.64■□□□□ 0.41
CDC7O00311 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDC7O00311 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDC7O00311 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.64■□□□□ 0.41
CDC7O00311 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDC7O00311 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 KRT18P38-201ENST00000449496 1282 ntBASIC17.64■□□□□ 0.41
CDC7O00311 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.64■□□□□ 0.41
CDC7O00311 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.64■□□□□ 0.41
CDC7O00311 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.64■□□□□ 0.41
CDC7O00311 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.64■□□□□ 0.41
CDC7O00311 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.64■□□□□ 0.41
CDC7O00311 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.64■□□□□ 0.41
CDC7O00311 AC006011.2-201ENST00000621313 1158 ntBASIC17.64■□□□□ 0.41
CDC7O00311 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC7O00311 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CDC7O00311 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDC7O00311 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDC7O00311 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC7O00311 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDC7O00311 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC7O00311 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC7O00311 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC7O00311 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.63■□□□□ 0.41
CDC7O00311 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC7O00311 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC7O00311 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC7O00311 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDC7O00311 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.63■□□□□ 0.41
CDC7O00311 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDC7O00311 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.63■□□□□ 0.41
CDC7O00311 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDC7O00311 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.63■□□□□ 0.41
CDC7O00311 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDC7O00311 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms