Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 HEIH-201ENST00000623091 1652 ntBASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 AL163051.1-201ENST00000569214 1512 ntBASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 NOC2LP1-202ENST00000452600 2235 ntBASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA9Q9Y5G4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 KRT18P13-201ENST00000400056 1290 ntBASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 AC096582.2-201ENST00000510860 516 ntBASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 KRT18P58-201ENST00000527480 1120 ntBASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 AL357033.4-201ENST00000617703 1807 ntBASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA9Q9Y5G4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 RNPS1P1-201ENST00000507437 918 ntBASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 AC008608.2-201ENST00000606089 416 ntBASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 AC139530.3-201ENST00000620344 690 ntBASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA9Q9Y5G4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA9Q9Y5G4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms