Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMARCAL1Q9NZC9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 MIR718-201ENST00000390190 70 ntBASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCAL1Q9NZC9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 AC132938.6-201ENST00000623828 1655 ntBASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 KRT18P23-201ENST00000435622 1283 ntBASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCAL1Q9NZC9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCAL1Q9NZC9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms