Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 SIRPAP1-201ENST00000448467 1770 ntBASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 CNN2P11-201ENST00000429351 262 ntBASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 AC018845.2-201ENST00000568326 409 ntBASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 MIR3197-201ENST00000582241 73 ntBASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC52A1Q9NWF4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 PHGDH-209ENST00000641074 1780 ntBASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC25.59■■□□□ 1.69
SLC52A1Q9NWF4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 AC003669.1-201ENST00000334569 611 ntBASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 IGLL3P-201ENST00000412472 434 ntBASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 SIGLEC30P-201ENST00000455569 941 ntBASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 AC004790.2-201ENST00000623588 572 ntBASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 AL805961.1-202ENST00000641562 540 ntBASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SLC52A1Q9NWF4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
SLC52A1Q9NWF4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SLC52A1Q9NWF4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 GPR89P-201ENST00000407924 1495 ntBASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 FUT8-AS1-201ENST00000621019 1521 ntBASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SLC52A1Q9NWF4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 AL645939.2-201ENST00000427340 991 ntBASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 AC010654.1-201ENST00000615722 808 ntBASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC25.56■■□□□ 1.68
SLC52A1Q9NWF4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 AP002472.1-201ENST00000577490 586 ntBASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 AC019129.2-201ENST00000609837 1235 ntBASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLC52A1Q9NWF4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms