Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 AL355312.1-201ENST00000407115 2176 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 TSPY14P-201ENST00000303979 915 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 SLC25A1P2-201ENST00000430693 912 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 CCR12P-201ENST00000446203 998 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 AC128688.1-201ENST00000487626 519 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 CR769767.2-201ENST00000622735 460 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 AC116562.4-202ENST00000641738 218 ntBASIC16.27■□□□□ 0.2
HINT3Q9NQE9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HINT3Q9NQE9 OR6D1P-202ENST00000641007 5290 ntBASIC16.27■□□□□ 0.19
HINT3Q9NQE9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HINT3Q9NQE9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.26■□□□□ 0.19
HINT3Q9NQE9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 AP003041.3-201ENST00000527151 707 ntBASIC16.26■□□□□ 0.19
HINT3Q9NQE9 WWOX-216ENST00000569818 525 ntBASIC16.26■□□□□ 0.19
HINT3Q9NQE9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HINT3Q9NQE9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 AL023803.3-201ENST00000615559 522 ntBASIC16.25■□□□□ 0.19
HINT3Q9NQE9 AC005363.2-201ENST00000618631 242 ntBASIC16.25■□□□□ 0.19
HINT3Q9NQE9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 AL023806.1-201ENST00000603994 1649 ntBASIC16.25■□□□□ 0.19
HINT3Q9NQE9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HINT3Q9NQE9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms