Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.22■□□□□ 0.35
PIF1Q9H611 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 MESTP1-201ENST00000404287 994 ntBASIC17.22■□□□□ 0.35
PIF1Q9H611 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.22■□□□□ 0.35
PIF1Q9H611 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.22■□□□□ 0.35
PIF1Q9H611 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.22■□□□□ 0.35
PIF1Q9H611 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PIF1Q9H611 SLC25A1P4-201ENST00000567977 778 ntBASIC17.22■□□□□ 0.35
PIF1Q9H611 AC233702.5-201ENST00000584107 538 ntBASIC17.22■□□□□ 0.35
PIF1Q9H611 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.22■□□□□ 0.35
PIF1Q9H611 AP000692.2-201ENST00000608391 879 ntBASIC17.22■□□□□ 0.35
PIF1Q9H611 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PIF1Q9H611 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.22■□□□□ 0.35
PIF1Q9H611 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.22■□□□□ 0.35
PIF1Q9H611 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PIF1Q9H611 AL163051.1-201ENST00000569214 1512 ntBASIC17.21■□□□□ 0.35
PIF1Q9H611 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.21■□□□□ 0.35
PIF1Q9H611 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
PIF1Q9H611 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PIF1Q9H611 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 RPS2P55-201ENST00000397318 883 ntBASIC17.21■□□□□ 0.35
PIF1Q9H611 FAM197Y1-201ENST00000421178 764 ntBASIC17.21■□□□□ 0.35
PIF1Q9H611 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 AC107956.1-201ENST00000494359 873 ntBASIC17.21■□□□□ 0.35
PIF1Q9H611 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.21■□□□□ 0.35
PIF1Q9H611 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.21■□□□□ 0.35
PIF1Q9H611 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.21■□□□□ 0.35
PIF1Q9H611 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PIF1Q9H611 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PIF1Q9H611 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PIF1Q9H611 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PIF1Q9H611 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
PIF1Q9H611 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.2■□□□□ 0.34
PIF1Q9H611 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PIF1Q9H611 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 FSCN1P1-201ENST00000568912 1481 ntBASIC17.2■□□□□ 0.34
PIF1Q9H611 AC009102.3-201ENST00000623118 1491 ntBASIC17.2■□□□□ 0.34
PIF1Q9H611 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.2■□□□□ 0.34
PIF1Q9H611 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.2■□□□□ 0.34
PIF1Q9H611 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PIF1Q9H611 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PIF1Q9H611 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PIF1Q9H611 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.2■□□□□ 0.34
PIF1Q9H611 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PIF1Q9H611 AD000864.1-201ENST00000624076 2295 ntBASIC17.19■□□□□ 0.34
PIF1Q9H611 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms