Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX47Q9H0S4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 AL138688.1-201ENST00000624851 1594 ntBASIC18.76■□□□□ 0.59
DDX47Q9H0S4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 CR769767.2-201ENST00000622735 460 ntBASIC18.76■□□□□ 0.59
DDX47Q9H0S4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX47Q9H0S4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 DUTP2-201ENST00000519164 463 ntBASIC18.75■□□□□ 0.59
DDX47Q9H0S4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX47Q9H0S4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 AP003041.3-201ENST00000527151 707 ntBASIC18.74■□□□□ 0.59
DDX47Q9H0S4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.74■□□□□ 0.59
DDX47Q9H0S4 REXO1L12P-201ENST00000622156 912 ntBASIC18.74■□□□□ 0.59
DDX47Q9H0S4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 AL135905.2-201ENST00000584934 1404 ntBASIC18.74■□□□□ 0.59
DDX47Q9H0S4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX47Q9H0S4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms