Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 AC079776.4-201ENST00000511039 504 ntBASIC18.61■□□□□ 0.57
RNF38Q9H0F5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 AL662844.1-201ENST00000546340 181 ntBASIC18.61■□□□□ 0.57
RNF38Q9H0F5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 AL355877.3-201ENST00000622820 899 ntBASIC18.61■□□□□ 0.57
RNF38Q9H0F5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF38Q9H0F5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 AC097374.2-201ENST00000618617 1306 ntBASIC18.6■□□□□ 0.57
RNF38Q9H0F5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 RNA5SP419-201ENST00000515908 135 ntBASIC18.6■□□□□ 0.57
RNF38Q9H0F5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 MTDHP3-201ENST00000594186 672 ntBASIC18.6■□□□□ 0.57
RNF38Q9H0F5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 AC148477.8-201ENST00000624298 468 ntBASIC18.6■□□□□ 0.57
RNF38Q9H0F5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF38Q9H0F5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 AP005117.1-201ENST00000584346 1413 ntBASIC18.59■□□□□ 0.57
RNF38Q9H0F5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 KRT8P47-201ENST00000604727 1398 ntBASIC18.59■□□□□ 0.57
RNF38Q9H0F5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 AC007967.3-201ENST00000434308 558 ntBASIC18.59■□□□□ 0.57
RNF38Q9H0F5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 FGFR3P6-201ENST00000457012 610 ntBASIC18.59■□□□□ 0.57
RNF38Q9H0F5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 DUTP2-201ENST00000519164 463 ntBASIC18.59■□□□□ 0.57
RNF38Q9H0F5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF38Q9H0F5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RNF38Q9H0F5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms