Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACSIN1Q9BY11 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACSIN1Q9BY11 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PACSIN1Q9BY11 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.16■□□□□ 0.66
PACSIN1Q9BY11 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 NAPSB-206ENST00000562112 1266 ntBASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 AC022211.2-201ENST00000585075 2527 ntBASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 PRORSD1P-202ENST00000563365 2154 ntBASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACSIN1Q9BY11 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PACSIN1Q9BY11 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PACSIN1Q9BY11 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PACSIN1Q9BY11 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PACSIN1Q9BY11 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 LINC00602-201ENST00000629776 2065 ntBASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 AC128688.1-201ENST00000487626 519 ntBASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PACSIN1Q9BY11 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 MMP23A-201ENST00000234610 1017 ntBASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 AP006294.2-201ENST00000641667 209 ntBASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACSIN1Q9BY11 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms