Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 AC112698.1-201ENST00000510299 916 ntBASIC17.42■□□□□ 0.38
SLC38A3Q99624 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 AP002469.2-201ENST00000531724 424 ntBASIC17.42■□□□□ 0.38
SLC38A3Q99624 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC38A3Q99624 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC38A3Q99624 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC38A3Q99624 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SLC38A3Q99624 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC38A3Q99624 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC38A3Q99624 AC132008.2-207ENST00000454517 770 ntBASIC17.41■□□□□ 0.38
SLC38A3Q99624 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC38A3Q99624 AL662844.1-201ENST00000546340 181 ntBASIC17.41■□□□□ 0.38
SLC38A3Q99624 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC38A3Q99624 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC38A3Q99624 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 BX323043.1-201ENST00000641006 1765 ntBASIC17.4■□□□□ 0.38
SLC38A3Q99624 AC073592.3-201ENST00000625118 1834 ntBASIC17.4■□□□□ 0.38
SLC38A3Q99624 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC38A3Q99624 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC38A3Q99624 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC38A3Q99624 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 AF238378.1-201ENST00000526806 358 ntBASIC17.4■□□□□ 0.38
SLC38A3Q99624 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 AL138831.2-201ENST00000606564 490 ntBASIC17.4■□□□□ 0.38
SLC38A3Q99624 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC38A3Q99624 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC38A3Q99624 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC38A3Q99624 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC38A3Q99624 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC38A3Q99624 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC38A3Q99624 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC38A3Q99624 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLC38A3Q99624 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC38A3Q99624 AC125634.1-201ENST00000438758 1403 ntBASIC17.39■□□□□ 0.38
SLC38A3Q99624 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC38A3Q99624 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC38A3Q99624 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC38A3Q99624 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms