Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 AP005018.1-201ENST00000525475 301 ntBASIC19.46■□□□□ 0.71
ALPK3Q96L96 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ALPK3Q96L96 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 AC092919.2-201ENST00000623631 1645 ntBASIC19.46■□□□□ 0.71
ALPK3Q96L96 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ALPK3Q96L96 AC025580.3-201ENST00000617932 1424 ntBASIC19.46■□□□□ 0.71
ALPK3Q96L96 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
ALPK3Q96L96 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.46■□□□□ 0.7
ALPK3Q96L96 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 AC007064.4-201ENST00000637740 555 ntBASIC19.45■□□□□ 0.7
ALPK3Q96L96 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 MYLKP1-201ENST00000509077 1580 ntBASIC19.45■□□□□ 0.7
ALPK3Q96L96 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 TFAMP1-201ENST00000412727 736 ntBASIC19.45■□□□□ 0.7
ALPK3Q96L96 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 FAM207CP-201ENST00000443486 507 ntBASIC19.45■□□□□ 0.7
ALPK3Q96L96 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 AL606495.2-201ENST00000605867 535 ntBASIC19.45■□□□□ 0.7
ALPK3Q96L96 AC099522.2-201ENST00000607001 744 ntBASIC19.45■□□□□ 0.7
ALPK3Q96L96 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
ALPK3Q96L96 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ALPK3Q96L96 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ALPK3Q96L96 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALPK3Q96L96 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALPK3Q96L96 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 AC096734.2-201ENST00000562054 433 ntBASIC19.44■□□□□ 0.7
ALPK3Q96L96 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALPK3Q96L96 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALPK3Q96L96 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ALPK3Q96L96 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ALPK3Q96L96 AC132938.6-201ENST00000623828 1655 ntBASIC19.44■□□□□ 0.7
ALPK3Q96L96 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ALPK3Q96L96 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 AL020989.1-201ENST00000422979 469 ntBASIC19.43■□□□□ 0.7
ALPK3Q96L96 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.43■□□□□ 0.7
ALPK3Q96L96 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms