Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHAMP1Q96JM3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.87■□□□□ 0.93
CHAMP1Q96JM3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 UBE2SP1-201ENST00000450587 669 ntBASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 AC233702.5-201ENST00000584107 538 ntBASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 AC026471.5-201ENST00000615068 467 ntBASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CHAMP1Q96JM3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 AC018695.7-201ENST00000624587 2492 ntBASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 AP000525.1-201ENST00000608286 694 ntBASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHAMP1Q96JM3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 RBM17P1-201ENST00000453646 1190 ntBASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 AP003071.4-201ENST00000562276 1284 ntBASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 AL353719.1-201ENST00000566847 864 ntBASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 AC092338.2-201ENST00000568827 1415 ntBASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHAMP1Q96JM3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.83■□□□□ 0.93
CHAMP1Q96JM3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms