Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 SPDYE21P-201ENST00000413323 827 ntBASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 AC004832.2-201ENST00000426397 482 ntBASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 PGM5P2-202ENST00000637225 1043 ntBASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RAPGEF4Q8WZA2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 AC073621.1-201ENST00000392730 636 ntBASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 AC103564.2-201ENST00000432853 1299 ntBASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 AC002347.1-201ENST00000569543 541 ntBASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 AC093010.1-201ENST00000473625 1624 ntBASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF4Q8WZA2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 AP001160.2-201ENST00000596071 487 ntBASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF4Q8WZA2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 AC120498.9-201ENST00000339021 3867 ntBASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 RPS8P6-201ENST00000426177 609 ntBASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 AC136632.2-201ENST00000512891 861 ntBASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 AC073592.5-201ENST00000624854 528 ntBASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 PHGDH-209ENST00000641074 1780 ntBASIC23.46■■□□□ 1.35
RAPGEF4Q8WZA2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RAPGEF4Q8WZA2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.45■■□□□ 1.35
RAPGEF4Q8WZA2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RAPGEF4Q8WZA2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RAPGEF4Q8WZA2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RAPGEF4Q8WZA2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RAPGEF4Q8WZA2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 AL031598.1-201ENST00000561511 1773 ntBASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 AC023274.1-201ENST00000418278 595 ntBASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 AC004967.1-201ENST00000453589 447 ntBASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.45■■□□□ 1.34
RAPGEF4Q8WZA2 AC108751.1-201ENST00000490852 363 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms