Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 AC007663.1-201ENST00000438948 1240 ntBASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 RBM17P1-201ENST00000453646 1190 ntBASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 LINC00167-201ENST00000530583 1419 ntBASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC44A1Q8WWI5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 UNC93B2-201ENST00000285383 730 ntBASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC44A1Q8WWI5 AC084018.2-201ENST00000613093 2607 ntBASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 HLA-J-201ENST00000462773 1622 ntBASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 SEC1P-202ENST00000473944 940 ntBASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 AC116562.4-202ENST00000641738 218 ntBASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SLC44A1Q8WWI5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 AL121761.2-201ENST00000598007 1648 ntBASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms