Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 FLJ38576-201ENST00000623820 2459 ntBASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 MYC-209ENST00000641252 345 ntBASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SMIM4Q8WVI0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 DUTP2-201ENST00000519164 463 ntBASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 AC131212.4-201ENST00000623606 975 ntBASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMIM4Q8WVI0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 AC097658.1-201ENST00000475555 843 ntBASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 AC091390.4-202ENST00000476426 537 ntBASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 CKBP1-201ENST00000565489 1086 ntBASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 LINC01126-201ENST00000623515 1646 ntBASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 AC100803.2-201ENST00000562459 1963 ntBASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 OR6D1P-203ENST00000641209 4860 ntBASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SMIM4Q8WVI0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.37■□□□□ 0.05
SMIM4Q8WVI0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms