Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3TC2Q8TF17 AL096865.1-201ENST00000606796 927 ntBASIC20.33■□□□□ 0.85
SH3TC2Q8TF17 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3TC2Q8TF17 PCDHAC2-203ENST00000615316 3011 ntBASIC20.33■□□□□ 0.84
SH3TC2Q8TF17 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.33■□□□□ 0.84
SH3TC2Q8TF17 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.33■□□□□ 0.84
SH3TC2Q8TF17 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3TC2Q8TF17 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH3TC2Q8TF17 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 AC079776.2-201ENST00000641154 1609 ntBASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 HLA-J-202ENST00000469281 1241 ntBASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH3TC2Q8TF17 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 CRYGEP-201ENST00000412192 528 ntBASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 AC092474.2-201ENST00000424288 719 ntBASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
SH3TC2Q8TF17 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 GPR89P-201ENST00000407924 1495 ntBASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 MKNK2P1-201ENST00000437526 628 ntBASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SH3TC2Q8TF17 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 TSEN15P1-201ENST00000423257 515 ntBASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 AC093512.1-201ENST00000617969 520 ntBASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH3TC2Q8TF17 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms