Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.05■□□□□ 0.16
CHD6Q8TD26 AC026150.2-201ENST00000564693 1156 ntBASIC16.05■□□□□ 0.16
CHD6Q8TD26 KRT8P32-201ENST00000512863 1461 ntBASIC16.05■□□□□ 0.16
CHD6Q8TD26 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.05■□□□□ 0.16
CHD6Q8TD26 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHD6Q8TD26 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHD6Q8TD26 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CHD6Q8TD26 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CHD6Q8TD26 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 AC079140.1-201ENST00000508039 487 ntBASIC16.04■□□□□ 0.16
CHD6Q8TD26 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 MIR663B-201ENST00000408361 115 ntBASIC16.04■□□□□ 0.16
CHD6Q8TD26 SPDYE14P-201ENST00000442619 822 ntBASIC16.04■□□□□ 0.16
CHD6Q8TD26 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 API5-211ENST00000534695 560 ntTSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 LINC00602-201ENST00000629776 2065 ntBASIC16.04■□□□□ 0.16
CHD6Q8TD26 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHD6Q8TD26 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHD6Q8TD26 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 RBPMS2P1-201ENST00000437762 623 ntBASIC16.03■□□□□ 0.16
CHD6Q8TD26 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 AL391422.3-201ENST00000603791 2761 ntBASIC16.03■□□□□ 0.16
CHD6Q8TD26 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CHD6Q8TD26 DFFBP1-201ENST00000433250 979 ntBASIC16.03■□□□□ 0.16
CHD6Q8TD26 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHD6Q8TD26 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.02■□□□□ 0.16
CHD6Q8TD26 AL391825.1-201ENST00000457671 1364 ntBASIC16.02■□□□□ 0.16
CHD6Q8TD26 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD6Q8TD26 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.02■□□□□ 0.16
CHD6Q8TD26 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.02■□□□□ 0.16
CHD6Q8TD26 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.02■□□□□ 0.16
CHD6Q8TD26 AC243562.1-201ENST00000560672 389 ntBASIC16.02■□□□□ 0.16
CHD6Q8TD26 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD6Q8TD26 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CHD6Q8TD26 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.02■□□□□ 0.15
CHD6Q8TD26 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CHD6Q8TD26 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms