Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 AC034105.1-201ENST00000563488 319 ntBASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 AC010327.4-202ENST00000591484 748 ntBASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 Z83851.2-201ENST00000609564 659 ntBASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC149Q6ZUS6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 KRT18P3-201ENST00000451602 1288 ntBASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 AC055717.3-201ENST00000622967 595 ntBASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC149Q6ZUS6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC149Q6ZUS6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CCDC149Q6ZUS6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC149Q6ZUS6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC149Q6ZUS6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CCDC149Q6ZUS6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC149Q6ZUS6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 ESPNP-201ENST00000270691 2015 ntBASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC149Q6ZUS6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 GPX1P2-201ENST00000429271 606 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 DNAJB3-201ENST00000446806 729 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 RNA5SP415-201ENST00000517246 115 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 MIR3687-2-201ENST00000577708 61 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 AC025062.2-201ENST00000605477 670 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 MIR3687-1-201ENST00000614492 61 ntBASIC18.82■□□□□ 0.6
CCDC149Q6ZUS6 AC008735.5-201ENST00000623544 497 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms