Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 AK4P3-201ENST00000418260 669 ntBASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 AC063952.2-201ENST00000498792 1227 ntBASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 RN7SL850P-201ENST00000579959 291 ntBASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 AL136038.4-201ENST00000603606 1261 ntBASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NHLRC1Q6VVB1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 HBZP1-201ENST00000354915 429 ntBASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 FAM8A6P-201ENST00000407496 1135 ntBASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 HOMER2P1-201ENST00000455653 964 ntBASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NHLRC1Q6VVB1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 MIR662-201ENST00000384847 95 ntBASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.16■□□□□ 0.18
NHLRC1Q6VVB1 SPDYE13P-201ENST00000445314 798 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms