Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MIR574-201ENST00000385209 96 ntBASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 AC097374.2-201ENST00000618617 1306 ntBASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC62Q6P9F0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 AC073648.2-201ENST00000510116 352 ntBASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 SART3-203ENST00000546611 1184 ntBASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 AC021087.4-201ENST00000563761 564 ntBASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC62Q6P9F0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC62Q6P9F0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 AC139887.3-201ENST00000568585 713 ntBASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC62Q6P9F0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms