Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LGSNQ5TDP6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 AC012313.1-201ENST00000593393 3059 ntBASIC18.16■□□□□ 0.5
LGSNQ5TDP6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 AP001412.1-201ENST00000608405 714 ntBASIC18.16■□□□□ 0.5
LGSNQ5TDP6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LGSNQ5TDP6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 MIR4674-201ENST00000582457 87 ntBASIC18.15■□□□□ 0.5
LGSNQ5TDP6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 AC022898.2-201ENST00000616822 1312 ntBASIC18.15■□□□□ 0.5
LGSNQ5TDP6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LGSNQ5TDP6 FER1L4-210ENST00000615531 5998 ntBASIC18.14■□□□□ 0.5
LGSNQ5TDP6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LGSNQ5TDP6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LGSNQ5TDP6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 TSPY17P-201ENST00000450329 467 ntBASIC18.14■□□□□ 0.49
LGSNQ5TDP6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 WWOX-216ENST00000569818 525 ntBASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AL359736.2-201ENST00000621992 437 ntBASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 AC009053.2-201ENST00000563701 2365 ntBASIC18.14■□□□□ 0.49
LGSNQ5TDP6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LGSNQ5TDP6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms