Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HERC4Q5GLZ8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 AP000997.3-201ENST00000623333 2250 ntBASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 AL133373.2-201ENST00000623187 2828 ntBASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 FLJ13224-201ENST00000313737 1514 ntBASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HERC4Q5GLZ8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 AL022342.1-201ENST00000400363 863 ntBASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HERC4Q5GLZ8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HERC4Q5GLZ8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms