Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.36■□□□□ 0.69
SMAD3P84022 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SMAD3P84022 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
SMAD3P84022 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.36■□□□□ 0.69
SMAD3P84022 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.36■□□□□ 0.69
SMAD3P84022 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.36■□□□□ 0.69
SMAD3P84022 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.36■□□□□ 0.69
SMAD3P84022 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.36■□□□□ 0.69
SMAD3P84022 AF228730.6-201ENST00000641497 218 ntBASIC19.36■□□□□ 0.69
SMAD3P84022 AC084121.3-201ENST00000641716 218 ntBASIC19.36■□□□□ 0.69
SMAD3P84022 AC105233.6-201ENST00000642093 218 ntBASIC19.36■□□□□ 0.69
SMAD3P84022 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD3P84022 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SMAD3P84022 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SMAD3P84022 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.35■□□□□ 0.69
SMAD3P84022 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 GPR89P-201ENST00000407924 1495 ntBASIC19.35■□□□□ 0.69
SMAD3P84022 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD3P84022 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD3P84022 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 PRYP5-201ENST00000451909 266 ntBASIC19.35■□□□□ 0.69
SMAD3P84022 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.35■□□□□ 0.69
SMAD3P84022 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.35■□□□□ 0.69
SMAD3P84022 AC004449.1-201ENST00000564240 433 ntBASIC19.35■□□□□ 0.69
SMAD3P84022 AL031432.2-201ENST00000566714 459 ntBASIC19.35■□□□□ 0.69
SMAD3P84022 AL928711.1-201ENST00000570165 459 ntBASIC19.35■□□□□ 0.69
SMAD3P84022 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.35■□□□□ 0.69
SMAD3P84022 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD3P84022 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD3P84022 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
SMAD3P84022 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.35■□□□□ 0.69
SMAD3P84022 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD3P84022 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.34■□□□□ 0.69
SMAD3P84022 AC005332.7-201ENST00000614046 2005 ntBASIC19.34■□□□□ 0.69
SMAD3P84022 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.34■□□□□ 0.69
SMAD3P84022 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMAD3P84022 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.34■□□□□ 0.69
SMAD3P84022 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMAD3P84022 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
SMAD3P84022 VN2R19P-201ENST00000442399 1052 ntBASIC19.34■□□□□ 0.69
SMAD3P84022 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.34■□□□□ 0.69
SMAD3P84022 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.34■□□□□ 0.69
SMAD3P84022 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.34■□□□□ 0.69
SMAD3P84022 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.34■□□□□ 0.69
SMAD3P84022 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.34■□□□□ 0.69
SMAD3P84022 AC018845.2-201ENST00000568326 409 ntBASIC19.34■□□□□ 0.69
SMAD3P84022 AC073592.4-201ENST00000623827 446 ntBASIC19.34■□□□□ 0.69
SMAD3P84022 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
SMAD3P84022 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.34■□□□□ 0.69
SMAD3P84022 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD3P84022 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.34■□□□□ 0.69
SMAD3P84022 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SMAD3P84022 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SMAD3P84022 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.33■□□□□ 0.69
SMAD3P84022 AL161938.1-201ENST00000569833 2180 ntBASIC19.33■□□□□ 0.69
SMAD3P84022 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD3P84022 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.33■□□□□ 0.69
SMAD3P84022 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD3P84022 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD3P84022 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
SMAD3P84022 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms