Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 SPDYE9P-201ENST00000570642 692 ntBASIC20.74■□□□□ 0.91
HTRA3P83110 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.74■□□□□ 0.91
HTRA3P83110 SPDYE10P-202ENST00000612005 668 ntBASIC20.74■□□□□ 0.91
HTRA3P83110 SPDYE8P-202ENST00000612377 668 ntBASIC20.74■□□□□ 0.91
HTRA3P83110 SPTSSB-204ENST00000617024 1292 ntBASIC20.74■□□□□ 0.91
HTRA3P83110 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTRA3P83110 AC073314.1-201ENST00000568729 2216 ntBASIC20.74■□□□□ 0.91
HTRA3P83110 IRX1P1-201ENST00000438849 1838 ntBASIC20.74■□□□□ 0.91
HTRA3P83110 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.73■□□□□ 0.91
HTRA3P83110 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.73■□□□□ 0.91
HTRA3P83110 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HTRA3P83110 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HTRA3P83110 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.73■□□□□ 0.91
HTRA3P83110 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.73■□□□□ 0.91
HTRA3P83110 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.73■□□□□ 0.91
HTRA3P83110 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.73■□□□□ 0.91
HTRA3P83110 AC092552.1-201ENST00000547243 906 ntBASIC20.73■□□□□ 0.91
HTRA3P83110 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.73■□□□□ 0.91
HTRA3P83110 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.73■□□□□ 0.91
HTRA3P83110 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.73■□□□□ 0.91
HTRA3P83110 AC004233.3-201ENST00000607794 1269 ntBASIC20.73■□□□□ 0.91
HTRA3P83110 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HTRA3P83110 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.73■□□□□ 0.91
HTRA3P83110 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTRA3P83110 SDHAP2-201ENST00000455183 2001 ntBASIC20.73■□□□□ 0.91
HTRA3P83110 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTRA3P83110 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTRA3P83110 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTRA3P83110 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
HTRA3P83110 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.72■□□□□ 0.91
HTRA3P83110 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTRA3P83110 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HTRA3P83110 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTRA3P83110 AC079776.1-201ENST00000401540 1152 ntBASIC20.72■□□□□ 0.91
HTRA3P83110 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.72■□□□□ 0.91
HTRA3P83110 ACA64.2-201ENST00000459014 129 ntBASIC20.72■□□□□ 0.91
HTRA3P83110 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.72■□□□□ 0.91
HTRA3P83110 AC079140.1-201ENST00000508039 487 ntBASIC20.72■□□□□ 0.91
HTRA3P83110 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.72■□□□□ 0.91
HTRA3P83110 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.72■□□□□ 0.91
HTRA3P83110 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.72■□□□□ 0.91
HTRA3P83110 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.72■□□□□ 0.91
HTRA3P83110 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTRA3P83110 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.72■□□□□ 0.91
HTRA3P83110 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTRA3P83110 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.72■□□□□ 0.91
HTRA3P83110 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HTRA3P83110 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTRA3P83110 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTRA3P83110 HAUS4P1-201ENST00000406739 1145 ntBASIC20.71■□□□□ 0.91
HTRA3P83110 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTRA3P83110 AC092580.3-201ENST00000430932 139 ntBASIC20.71■□□□□ 0.91
HTRA3P83110 AC004890.2-204ENST00000481968 304 ntBASIC20.71■□□□□ 0.91
HTRA3P83110 GIMAP3P-201ENST00000495150 836 ntBASIC20.71■□□□□ 0.91
HTRA3P83110 CXCL1P1-201ENST00000502804 216 ntBASIC20.71■□□□□ 0.91
HTRA3P83110 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HTRA3P83110 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTRA3P83110 AL158211.3-201ENST00000607385 239 ntBASIC20.71■□□□□ 0.91
HTRA3P83110 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.71■□□□□ 0.91
HTRA3P83110 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.71■□□□□ 0.91
HTRA3P83110 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTRA3P83110 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
HTRA3P83110 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.71■□□□□ 0.91
HTRA3P83110 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTRA3P83110 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.71■□□□□ 0.91
HTRA3P83110 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
HTRA3P83110 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
HTRA3P83110 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.7■□□□□ 0.9
HTRA3P83110 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.7■□□□□ 0.9
HTRA3P83110 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.7■□□□□ 0.9
HTRA3P83110 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.7■□□□□ 0.9
HTRA3P83110 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.7■□□□□ 0.9
HTRA3P83110 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.7■□□□□ 0.9
HTRA3P83110 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.7■□□□□ 0.9
HTRA3P83110 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HTRA3P83110 TMEM261P1-201ENST00000604899 340 ntBASIC20.7■□□□□ 0.9
HTRA3P83110 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HTRA3P83110 IGHV3-72-202ENST00000621503 303 ntBASIC20.7■□□□□ 0.9
HTRA3P83110 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HTRA3P83110 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.7■□□□□ 0.9
HTRA3P83110 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTRA3P83110 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms