Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.7■□□□□ 0.9
HMGCS2P54868 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS2P54868 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGCS2P54868 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGCS2P54868 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGCS2P54868 KRT18P27-201ENST00000427733 1299 ntBASIC20.69■□□□□ 0.9
HMGCS2P54868 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGCS2P54868 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HMGCS2P54868 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGCS2P54868 PHGDH-209ENST00000641074 1780 ntBASIC20.69■□□□□ 0.9
HMGCS2P54868 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.69■□□□□ 0.9
HMGCS2P54868 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS2P54868 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HMGCS2P54868 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 AL031598.1-201ENST00000561511 1773 ntBASIC20.68■□□□□ 0.9
HMGCS2P54868 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.68■□□□□ 0.9
HMGCS2P54868 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 RPS8P6-201ENST00000426177 609 ntBASIC20.68■□□□□ 0.9
HMGCS2P54868 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.68■□□□□ 0.9
HMGCS2P54868 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HMGCS2P54868 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.68■□□□□ 0.9
HMGCS2P54868 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGCS2P54868 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGCS2P54868 MIR1199-201ENST00000621445 119 ntBASIC20.68■□□□□ 0.9
HMGCS2P54868 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGCS2P54868 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HMGCS2P54868 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGCS2P54868 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS2P54868 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
HMGCS2P54868 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HMGCS2P54868 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS2P54868 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS2P54868 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS2P54868 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGCS2P54868 AC073621.1-201ENST00000392730 636 ntBASIC20.67■□□□□ 0.9
HMGCS2P54868 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.67■□□□□ 0.9
HMGCS2P54868 SPDYE21P-201ENST00000413323 827 ntBASIC20.67■□□□□ 0.9
HMGCS2P54868 AC023274.1-201ENST00000418278 595 ntBASIC20.67■□□□□ 0.9
HMGCS2P54868 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.67■□□□□ 0.9
HMGCS2P54868 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.67■□□□□ 0.9
HMGCS2P54868 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCS2P54868 MIR3687-2-201ENST00000577708 61 ntBASIC20.67■□□□□ 0.9
HMGCS2P54868 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGCS2P54868 AC006557.2-201ENST00000592985 1240 ntBASIC20.67■□□□□ 0.9
HMGCS2P54868 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGCS2P54868 MIR3687-1-201ENST00000614492 61 ntBASIC20.67■□□□□ 0.9
HMGCS2P54868 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGCS2P54868 AC093010.1-201ENST00000473625 1624 ntBASIC20.67■□□□□ 0.9
HMGCS2P54868 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.67■□□□□ 0.9
HMGCS2P54868 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCS2P54868 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCS2P54868 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 DNAJB3-201ENST00000446806 729 ntBASIC20.66■□□□□ 0.9
HMGCS2P54868 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCS2P54868 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.66■□□□□ 0.9
HMGCS2P54868 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.66■□□□□ 0.9
HMGCS2P54868 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
HMGCS2P54868 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HMGCS2P54868 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCS2P54868 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGCS2P54868 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HMGCS2P54868 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCS2P54868 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCS2P54868 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
HMGCS2P54868 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCS2P54868 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS2P54868 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS2P54868 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCS2P54868 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCS2P54868 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCS2P54868 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms