Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQA2P01906 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
HLA-DQA2P01906 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQA2P01906 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DQA2P01906 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.21■□□□□ 0.19
HLA-DQA2P01906 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQA2P01906 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQA2P01906 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
HLA-DQA2P01906 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DQA2P01906 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DQA2P01906 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DQA2P01906 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 SLC25A6P5-201ENST00000435663 894 ntBASIC16.2■□□□□ 0.18
HLA-DQA2P01906 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.2■□□□□ 0.18
HLA-DQA2P01906 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DQA2P01906 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 AC010653.2-201ENST00000623505 997 ntBASIC16.19■□□□□ 0.18
HLA-DQA2P01906 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
HLA-DQA2P01906 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 AC104390.1-201ENST00000555663 520 ntBASIC16.18■□□□□ 0.18
HLA-DQA2P01906 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQA2P01906 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms