Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MSI1O43347 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MSI1O43347 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.68■□□□□ 0.58
MSI1O43347 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.68■□□□□ 0.58
MSI1O43347 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
MSI1O43347 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MSI1O43347 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MSI1O43347 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
MSI1O43347 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 AC246785.2-201ENST00000432512 513 ntBASIC18.68■□□□□ 0.58
MSI1O43347 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.68■□□□□ 0.58
MSI1O43347 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.68■□□□□ 0.58
MSI1O43347 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.68■□□□□ 0.58
MSI1O43347 FOSL1P1-201ENST00000511041 816 ntBASIC18.68■□□□□ 0.58
MSI1O43347 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.68■□□□□ 0.58
MSI1O43347 AC099336.1-202ENST00000602961 463 ntBASIC18.68■□□□□ 0.58
MSI1O43347 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.68■□□□□ 0.58
MSI1O43347 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.68■□□□□ 0.58
MSI1O43347 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.68■□□□□ 0.58
MSI1O43347 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.68■□□□□ 0.58
MSI1O43347 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
MSI1O43347 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.68■□□□□ 0.58
MSI1O43347 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
MSI1O43347 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MSI1O43347 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MSI1O43347 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MSI1O43347 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.67■□□□□ 0.58
MSI1O43347 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MSI1O43347 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.67■□□□□ 0.58
MSI1O43347 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MSI1O43347 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MSI1O43347 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.67■□□□□ 0.58
MSI1O43347 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.67■□□□□ 0.58
MSI1O43347 AC100803.2-201ENST00000562459 1963 ntBASIC18.67■□□□□ 0.58
MSI1O43347 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MSI1O43347 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MSI1O43347 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.67■□□□□ 0.58
MSI1O43347 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.67■□□□□ 0.58
MSI1O43347 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSI1O43347 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.66■□□□□ 0.58
MSI1O43347 ABALON-201ENST00000629058 1903 ntBASIC18.66■□□□□ 0.58
MSI1O43347 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.66■□□□□ 0.58
MSI1O43347 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 AC135050.7-201ENST00000624508 2218 ntBASIC18.66■□□□□ 0.58
MSI1O43347 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.66■□□□□ 0.58
MSI1O43347 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.66■□□□□ 0.58
MSI1O43347 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.66■□□□□ 0.58
MSI1O43347 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.66■□□□□ 0.58
MSI1O43347 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
MSI1O43347 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.66■□□□□ 0.58
MSI1O43347 MINOS1P3-201ENST00000457048 203 ntBASIC18.66■□□□□ 0.58
MSI1O43347 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSI1O43347 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms