Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 COX5BP2-201ENST00000392354 334 ntBASIC18.95■□□□□ 0.62
SYN3O14994 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.95■□□□□ 0.62
SYN3O14994 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.95■□□□□ 0.62
SYN3O14994 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 FAM215A-202ENST00000632077 792 ntBASIC18.95■□□□□ 0.62
SYN3O14994 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.95■□□□□ 0.62
SYN3O14994 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYN3O14994 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.95■□□□□ 0.62
SYN3O14994 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.94■□□□□ 0.62
SYN3O14994 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.94■□□□□ 0.62
SYN3O14994 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.94■□□□□ 0.62
SYN3O14994 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.94■□□□□ 0.62
SYN3O14994 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.94■□□□□ 0.62
SYN3O14994 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.94■□□□□ 0.62
SYN3O14994 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SYN3O14994 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 AC103564.2-201ENST00000432853 1299 ntBASIC18.94■□□□□ 0.62
SYN3O14994 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.94■□□□□ 0.62
SYN3O14994 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.94■□□□□ 0.62
SYN3O14994 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.94■□□□□ 0.62
SYN3O14994 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.94■□□□□ 0.62
SYN3O14994 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.94■□□□□ 0.62
SYN3O14994 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SYN3O14994 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SYN3O14994 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 IL9RP2-201ENST00000423948 1312 ntBASIC18.94■□□□□ 0.62
SYN3O14994 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYN3O14994 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
SYN3O14994 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYN3O14994 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SYN3O14994 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYN3O14994 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SYN3O14994 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.93■□□□□ 0.62
SYN3O14994 HNRNPDP1-201ENST00000439535 754 ntBASIC18.93■□□□□ 0.62
SYN3O14994 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.93■□□□□ 0.62
SYN3O14994 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYN3O14994 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.93■□□□□ 0.62
SYN3O14994 MIR7706-201ENST00000613747 67 ntBASIC18.93■□□□□ 0.62
SYN3O14994 AD001527.2-201ENST00000622994 785 ntBASIC18.93■□□□□ 0.62
SYN3O14994 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.93■□□□□ 0.62
SYN3O14994 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
SYN3O14994 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 PMPCAP1-201ENST00000508114 1576 ntBASIC18.93■□□□□ 0.62
SYN3O14994 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYN3O14994 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.93■□□□□ 0.62
SYN3O14994 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYN3O14994 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SYN3O14994 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN3O14994 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN3O14994 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN3O14994 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN3O14994 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYN3O14994 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYN3O14994 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms