Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 COPE-202ENST00000349893 948 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD2O14647 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 AP002414.1-201ENST00000391405 1147 ntBASIC24.84■■□□□ 1.57
CHD2O14647 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.84■■□□□ 1.57
CHD2O14647 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD2O14647 AL390955.2-201ENST00000603032 514 ntBASIC24.84■■□□□ 1.57
CHD2O14647 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CHD2O14647 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD2O14647 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD2O14647 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC24.84■■□□□ 1.57
CHD2O14647 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD2O14647 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD2O14647 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD2O14647 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD2O14647 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD2O14647 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD2O14647 INO80C-206ENST00000586489 594 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD2O14647 AC105339.1-204ENST00000636249 355 ntBASIC24.84■■□□□ 1.57
CHD2O14647 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CHD2O14647 ESPNP-201ENST00000270691 2015 ntBASIC24.84■■□□□ 1.57
CHD2O14647 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD2O14647 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD2O14647 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD2O14647 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD2O14647 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHD2O14647 NKTR-203ENST00000442970 646 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD2O14647 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHD2O14647 RBM7-207ENST00000544582 692 ntTSL 3 BASIC24.83■■□□□ 1.57
CHD2O14647 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD2O14647 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CHD2O14647 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
CHD2O14647 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CHD2O14647 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC24.83■■□□□ 1.57
CHD2O14647 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHD2O14647 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC24.83■■□□□ 1.56
CHD2O14647 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHD2O14647 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CHD2O14647 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC24.82■■□□□ 1.56
CHD2O14647 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CHD2O14647 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC24.82■■□□□ 1.56
CHD2O14647 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 AL049757.1-201ENST00000616842 1596 ntBASIC24.82■■□□□ 1.56
CHD2O14647 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
CHD2O14647 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC24.82■■□□□ 1.56
CHD2O14647 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.82■■□□□ 1.56
CHD2O14647 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 GMCL1P1-201ENST00000463439 1581 ntBASIC24.82■■□□□ 1.56
CHD2O14647 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.82■■□□□ 1.56
CHD2O14647 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC24.82■■□□□ 1.56
CHD2O14647 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD2O14647 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC24.82■■□□□ 1.56
CHD2O14647 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHD2O14647 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHD2O14647 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHD2O14647 ANO7L1-203ENST00000602586 1720 ntBASIC24.81■■□□□ 1.56
CHD2O14647 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHD2O14647 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
CHD2O14647 AC004449.1-201ENST00000564240 433 ntBASIC24.81■■□□□ 1.56
CHD2O14647 IGHV3OR16-6-201ENST00000568775 360 ntBASIC24.81■■□□□ 1.56
CHD2O14647 TK1-204ENST00000590430 683 ntTSL 3 BASIC24.81■■□□□ 1.56
CHD2O14647 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC24.81■■□□□ 1.56
CHD2O14647 MED16-214ENST00000617672 554 ntTSL 5 BASIC24.81■■□□□ 1.56
CHD2O14647 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
CHD2O14647 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
CHD2O14647 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC24.8■■□□□ 1.56
CHD2O14647 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CHD2O14647 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC24.8■■□□□ 1.56
CHD2O14647 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CHD2O14647 AC003669.1-201ENST00000334569 611 ntBASIC24.8■■□□□ 1.56
CHD2O14647 AQP6-203ENST00000551733 849 ntTSL 3 BASIC24.8■■□□□ 1.56
CHD2O14647 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CHD2O14647 GGTLC5P-201ENST00000617623 998 ntBASIC24.8■■□□□ 1.56
CHD2O14647 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CHD2O14647 AC007064.4-201ENST00000637740 555 ntBASIC24.8■■□□□ 1.56
CHD2O14647 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD2O14647 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.8■■□□□ 1.56
CHD2O14647 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD2O14647 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CHD2O14647 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms