Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 AC012313.1-201ENST00000593393 3059 ntBASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 AC141586.5-201ENST00000624546 2050 ntBASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM49BA6NDI0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM49BA6NDI0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 AC108860.2-201ENST00000562760 2183 ntBASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 AL391807.1-203ENST00000604392 2365 ntBASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 TERF1P1-201ENST00000311003 1181 ntBASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 LIN28AP1-201ENST00000429574 405 ntBASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM49BA6NDI0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM49BA6NDI0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 AC113347.1-201ENST00000413321 391 ntBASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 ATP5G1P1-201ENST00000448724 379 ntBASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 COX11P1-201ENST00000489116 835 ntBASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 AC034232.1-201ENST00000506026 1064 ntBASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 AC139887.4-201ENST00000607877 719 ntBASIC19.82■□□□□ 0.76
TRIM49BA6NDI0 AC011558.1-201ENST00000623459 338 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms