Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 AC010203.1-204ENST00000548782 407 ntBASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 GCSHP2-201ENST00000560971 527 ntBASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 AL157888.1-201ENST00000631930 593 ntBASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGA11Q9Y5H2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 AC113347.1-201ENST00000413321 391 ntBASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 AL137013.1-201ENST00000432946 1228 ntBASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 COX11P1-201ENST00000489116 835 ntBASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 AL139384.1-201ENST00000612143 3047 ntBASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGA11Q9Y5H2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 OR6D1P-202ENST00000641007 5290 ntBASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 AL023973.1-201ENST00000624619 620 ntBASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA11Q9Y5H2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms