Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 AC015922.1-201ENST00000421102 1152 ntBASIC17.03■□□□□ 0.32
LHX6Q9UPM6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX6Q9UPM6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 PRSS29P-201ENST00000440800 595 ntBASIC17.02■□□□□ 0.32
LHX6Q9UPM6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 AC064836.3-201ENST00000607928 673 ntBASIC17.02■□□□□ 0.32
LHX6Q9UPM6 AC012645.4-201ENST00000610691 1061 ntBASIC17.02■□□□□ 0.32
LHX6Q9UPM6 AC093512.1-201ENST00000617969 520 ntBASIC17.02■□□□□ 0.32
LHX6Q9UPM6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX6Q9UPM6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 KRT8P7-201ENST00000533003 1432 ntBASIC17.02■□□□□ 0.31
LHX6Q9UPM6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.02■□□□□ 0.31
LHX6Q9UPM6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 AC245100.3-201ENST00000441281 285 ntBASIC17.01■□□□□ 0.31
LHX6Q9UPM6 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC17.01■□□□□ 0.31
LHX6Q9UPM6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms