Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 TSPY19P-201ENST00000418461 509 ntBASIC20.73■□□□□ 0.91
DDX41Q9UJV9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 TSPY18P-201ENST00000441642 509 ntBASIC20.73■□□□□ 0.91
DDX41Q9UJV9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX41Q9UJV9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 RN7SL606P-201ENST00000472779 293 ntBASIC20.72■□□□□ 0.91
DDX41Q9UJV9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 AC012615.1-201ENST00000565797 1299 ntBASIC20.72■□□□□ 0.91
DDX41Q9UJV9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX41Q9UJV9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 AL845331.1-201ENST00000424978 1190 ntBASIC20.71■□□□□ 0.91
DDX41Q9UJV9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 AC111152.3-201ENST00000569699 673 ntBASIC20.71■□□□□ 0.91
DDX41Q9UJV9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 AL353692.3-201ENST00000407031 1396 ntBASIC20.71■□□□□ 0.91
DDX41Q9UJV9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX41Q9UJV9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
DDX41Q9UJV9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
DDX41Q9UJV9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
DDX41Q9UJV9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 AC020763.4-201ENST00000623414 4170 ntBASIC20.7■□□□□ 0.9
DDX41Q9UJV9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX41Q9UJV9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms