Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.68■□□□□ 0.9
USP25Q9UHP3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 TSPY7P-201ENST00000431358 1114 ntBASIC20.68■□□□□ 0.9
USP25Q9UHP3 KRT18P23-201ENST00000435622 1283 ntBASIC20.68■□□□□ 0.9
USP25Q9UHP3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 AC009065.1-201ENST00000564055 1225 ntBASIC20.68■□□□□ 0.9
USP25Q9UHP3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 CR769767.2-201ENST00000622735 460 ntBASIC20.68■□□□□ 0.9
USP25Q9UHP3 AC116562.4-202ENST00000641738 218 ntBASIC20.68■□□□□ 0.9
USP25Q9UHP3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP25Q9UHP3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.68■□□□□ 0.9
USP25Q9UHP3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 SDHAP2-201ENST00000455183 2001 ntBASIC20.67■□□□□ 0.9
USP25Q9UHP3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 C2orf69P3-201ENST00000565542 1120 ntBASIC20.67■□□□□ 0.9
USP25Q9UHP3 MIR3180-4-201ENST00000582223 153 ntBASIC20.67■□□□□ 0.9
USP25Q9UHP3 AP000525.1-201ENST00000608286 694 ntBASIC20.67■□□□□ 0.9
USP25Q9UHP3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 TMEM191A-211ENST00000637163 1067 ntBASIC20.67■□□□□ 0.9
USP25Q9UHP3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.67■□□□□ 0.9
USP25Q9UHP3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.67■□□□□ 0.9
USP25Q9UHP3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP25Q9UHP3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 AL096828.2-201ENST00000567259 1965 ntBASIC20.66■□□□□ 0.9
USP25Q9UHP3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 AC010653.2-201ENST00000623505 997 ntBASIC20.66■□□□□ 0.9
USP25Q9UHP3 AP006294.2-201ENST00000641667 209 ntBASIC20.66■□□□□ 0.9
USP25Q9UHP3 KRT17P2-201ENST00000300992 1314 ntBASIC20.66■□□□□ 0.9
USP25Q9UHP3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.66■□□□□ 0.9
USP25Q9UHP3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP25Q9UHP3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP25Q9UHP3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.65■□□□□ 0.9
USP25Q9UHP3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP25Q9UHP3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP25Q9UHP3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP25Q9UHP3 AC007663.1-201ENST00000438948 1240 ntBASIC20.65■□□□□ 0.9
USP25Q9UHP3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP25Q9UHP3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.65■□□□□ 0.9
USP25Q9UHP3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.65■□□□□ 0.9
USP25Q9UHP3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP25Q9UHP3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.65■□□□□ 0.9
USP25Q9UHP3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms