Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 LINC01126-201ENST00000623515 1646 ntBASIC15.78■□□□□ 0.12
CDH20Q9HBT6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDH20Q9HBT6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 AL136038.3-201ENST00000561909 1096 ntBASIC15.77■□□□□ 0.12
CDH20Q9HBT6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDH20Q9HBT6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.77■□□□□ 0.11
CDH20Q9HBT6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDH20Q9HBT6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.76■□□□□ 0.11
CDH20Q9HBT6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDH20Q9HBT6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms